ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 885.00 0.06 2.67 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 166.00 0.01 0.50 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2244.00 0.14 6.78 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 825.00 0.05 2.49 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 928.00 0.06 2.80 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 21921.00 1.41 66.23 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 190.00 0.01 0.57 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 4005.00 0.26 12.10 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 66427.00 4.27 200.69 84.4 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 2427.00 0.16 7.33 90.12 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 31.00 0.00 0.09 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 40.00 0.00 0.12 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 19806.00 1.27 59.84 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 5087.00 0.33 15.37 84.52 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1780.21 0.11 5.38 38.65 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1299.00 0.08 3.92 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3890.00 0.25 11.75 63.07 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 2231.00 0.14 6.74 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 321.00 0.02 0.97 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 5135.00 13.22 15.51 100.0 SNHG5-273 lncRNA Peyer's patch (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 331.90 0.85 1.00 87.11 SNHG5-273 lncRNA Peyer's patch (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 187.00 0.48 0.56 100.0 SNHG5-273 lncRNA Peyer's patch (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 409.00 1.05 1.24 100.0 SNHG5-273 lncRNA Peyer's patch (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 52.82 0.14 0.16 13.86 SNHG5-273 lncRNA Peyer's patch (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 14751.00 37.98 44.57 99.97 SNHG5-273 lncRNA Peyer's patch (Tissue)