ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 829.00 61.09 2.50 83.82 MIR99AHG-262 lncRNA Peyer's patch (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 241.00 17.76 0.73 100.0 MIR99AHG-262 lncRNA Peyer's patch (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 124.00 74.25 0.37 94.66 MIR9-2HG-225 lncRNA Peyer's patch (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 718.00 59.09 2.17 100.0 MEG8-233 lncRNA Peyer's patch (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 120.00 9.88 0.36 100.0 MEG8-233 lncRNA Peyer's patch (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 173.00 36.81 0.52 100.0 MEG8-234 lncRNA Peyer's patch (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 64.00 13.62 0.19 100.0 MEG8-234 lncRNA Peyer's patch (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 32.00 61.54 0.10 100.0 MEG8-240 lncRNA Peyer's patch (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 6.00 28.57 0.02 100.0 SNHG14-306 lncRNA Peyer's patch (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 240.00 8.86 0.73 100.0 ENST00000666735 lncRNA Peyer's patch (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 58.00 2.14 0.18 100.0 ENST00000666735 lncRNA Peyer's patch (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 496.00 78.98 1.50 100.0 MEG8-242 lncRNA Peyer's patch (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 100.00 0.53 0.30 100.0 MEG8-244 lncRNA Peyer's patch (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 192.00 1.03 0.58 100.0 MEG8-244 lncRNA Peyer's patch (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 18126.00 96.77 54.76 99.88 MEG8-244 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1488.00 0.10 4.50 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 3.00 0.00 0.01 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 14909.00 0.96 45.04 98.94 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 3032.59 0.20 9.16 65.84 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 3943.00 0.25 11.91 74.96 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1074597.00 69.14 3246.60 99.69 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1510.00 0.10 4.56 80.88 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 188418.00 12.12 569.25 99.45 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 22173.00 1.43 66.99 100.0 SNHG1-248 lncRNA Peyer's patch (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 49046.00 3.16 148.18 99.82 SNHG1-248 lncRNA Peyer's patch (Tissue)