ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 14.00 0.08 0.04 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 659.00 3.97 1.99 58.79 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 13.00 0.08 0.04 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 8.00 0.05 0.02 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 85.00 0.51 0.26 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2768.00 16.67 8.36 53.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 99.00 0.60 0.30 100.0 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 6777.00 40.82 20.47 85.88 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 10005.00 2.34 30.23 100.0 MIRLET7A1HG-203 lncRNA Peyer's patch (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 382.00 91.83 1.15 100.0 MEG8-225 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2395.00 24.23 7.24 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 4383.00 44.35 13.24 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 827.00 8.37 2.50 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 8.00 0.08 0.02 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 4.00 0.04 0.01 100.0 SNHG29-232 lncRNA Peyer's patch (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 113.00 6.57 0.34 100.0 SNHG14-234 lncRNA Peyer's patch (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 21.00 1.22 0.06 100.0 SNHG14-234 lncRNA Peyer's patch (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 3576.00 11.38 10.80 100.0 ENST00000655317 lncRNA Peyer's patch (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 7297.00 23.22 22.05 78.5 ENST00000655317 lncRNA Peyer's patch (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2938.00 0.71 8.88 92.56 LINC01962-202 lncRNA Peyer's patch (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 408397.00 98.17 1233.86 100.0 LINC01962-202 lncRNA Peyer's patch (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 390.00 0.09 1.18 100.0 LINC01962-202 lncRNA Peyer's patch (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 6093.00 96.47 18.41 100.0 MEG8-228 lncRNA Peyer's patch (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 14099.00 59.14 42.60 100.0 LIMD1-AS1-204 lncRNA Peyer's patch (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1416.00 5.94 4.28 95.87 LIMD1-AS1-204 lncRNA Peyer's patch (Tissue)