ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 23.00 7.40 0.07 100.0 DMRT2-209 protein coding Peyer's patch (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 927.00 52.49 2.80 100.0 SNORD98-201 snoRNA Peyer's patch (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 437.00 24.75 1.32 100.0 SNORD98-201 snoRNA Peyer's patch (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 99964.27 66.97 302.01 70.54 MIR106AHG-201 lncRNA Peyer's patch (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 5.19 0.00 0.02 39.95 MIR106AHG-201 lncRNA Peyer's patch (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 1.00 0.00 0.00 100.0 MIR106AHG-201 lncRNA Peyer's patch (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 6.82 0.00 0.02 52.43 MIR106AHG-201 lncRNA Peyer's patch (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 137.00 50.00 0.41 100.0 MEG8-222 lncRNA Peyer's patch (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 73.00 26.64 0.22 100.0 MEG8-222 lncRNA Peyer's patch (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 91.00 3.99 0.27 100.0 SNHG14-224 lncRNA Peyer's patch (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 494.00 21.64 1.49 81.38 SNHG14-224 lncRNA Peyer's patch (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 220.00 9.64 0.66 57.74 SNHG14-224 lncRNA Peyer's patch (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 6298.93 8.75 19.03 50.19 5S_rRNA.20-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 1319.00 27.46 3.98 100.0 HSPA9-211 retained intron Peyer's patch (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1172.00 24.40 3.54 52.51 HSPA9-211 retained intron Peyer's patch (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 2994.00 79.50 9.05 100.0 DNM3OS-205 lncRNA Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 1070.00 0.05 3.23 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 416.00 0.02 1.26 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 4949.00 0.24 14.95 91.31 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 157.00 0.01 0.47 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 671.00 0.03 2.03 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1778.00 0.09 5.37 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1769076.00 85.16 5344.77 99.89 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1018.00 0.05 3.08 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 14461.00 0.70 43.69 100.0 GAS5-230 retained intron Peyer's patch (Tissue)