ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 5.00 100.00 0.02 100.0 MIR376C-201 miRNA Peyer's patch (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 675.00 52.29 2.04 100.0 SNHG21-206 retained intron Peyer's patch (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 21523.00 47.70 65.03 97.59 MIR486-1-201 miRNA Peyer's patch (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 78865.00 71.97 238.27 99.99 NOP56-219 retained intron Peyer's patch (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 405.00 0.37 1.22 100.0 NOP56-219 retained intron Peyer's patch (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1892.00 1.73 5.72 100.0 NOP56-219 retained intron Peyer's patch (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 13486.00 12.31 40.74 58.77 NOP56-219 retained intron Peyer's patch (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1503.01 7.12 4.54 39.63 RNA5-8SN2-201 rRNA Peyer's patch (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 9.00 0.04 0.03 100.0 RNA5-8SN2-201 rRNA Peyer's patch (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 13034.00 61.75 39.38 100.0 RNA5-8SN2-201 rRNA Peyer's patch (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 5.00 0.02 0.02 100.0 RNA5-8SN2-201 rRNA Peyer's patch (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 2060.55 9.76 6.23 54.33 RNA5-8SN2-201 rRNA Peyer's patch (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 18.00 90.00 0.05 100.0 MIR7974-201 miRNA Peyer's patch (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 868.00 3.25 2.62 100.0 U2.3-201 snRNA Peyer's patch (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 11.00 0.04 0.03 26.83 U2.3-201 snRNA Peyer's patch (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 5.00 0.02 0.02 100.0 U2.3-201 snRNA Peyer's patch (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 1623.00 6.07 4.90 100.0 U2.3-201 snRNA Peyer's patch (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 3655.00 13.67 11.04 100.0 U2.3-201 snRNA Peyer's patch (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1009.00 4.33 3.05 100.0 U2.6-201 snRNA Peyer's patch (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 68.00 0.16 0.21 9.23 ENST00000619323 lncRNA Peyer's patch (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 40232.00 95.31 121.55 97.32 ENST00000619323 lncRNA Peyer's patch (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 484.00 22.85 1.46 100.0 SCARNA4-202 scaRNA Peyer's patch (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 704.00 82.92 2.13 100.0 ENST00000625572 miRNA Peyer's patch (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2341.00 88.07 7.07 100.0 ENST00000630615 snoRNA Peyer's patch (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 141.00 45.34 0.43 100.0 DMRT2-209 protein coding Peyer's patch (Tissue)