ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 645.00 9.73 1.95 99.69 RPL13-207 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 15115.00 3.64 45.67 57.31 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 8805.00 2.12 26.60 85.49 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 764.00 0.18 2.31 34.18 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 1847.00 0.44 5.58 70.98 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 154.00 0.04 0.47 31.17 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 3437.00 0.83 10.38 43.54 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 40034.00 9.64 120.95 83.27 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 309975.00 74.64 936.50 97.91 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1437.00 0.35 4.34 49.28 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 238.00 0.06 0.72 42.65 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 1772.00 0.43 5.35 100.0 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 3248.00 0.78 9.81 100.0 EIF4A2-219 retained intron Peyer's patch (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 5.00 2.18 0.02 100.0 RPS8-207 protein coding CDS not defined Peyer's patch (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 367.00 26.44 1.11 100.0 RPL7A-206 protein coding CDS not defined Peyer's patch (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 227.00 16.35 0.69 100.0 RPL7A-206 protein coding CDS not defined Peyer's patch (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 144.00 10.37 0.44 100.0 RPL7A-206 protein coding CDS not defined Peyer's patch (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 270020.00 91.36 815.79 96.97 RPL21-209 retained intron Peyer's patch (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 7.00 0.00 0.02 100.0 RPL21-209 retained intron Peyer's patch (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 4928.00 1.67 14.89 100.0 RPL21-209 retained intron Peyer's patch (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 615.00 0.21 1.86 100.0 RPL21-209 retained intron Peyer's patch (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 13433.00 4.55 40.58 96.29 RPL21-209 retained intron Peyer's patch (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 243.00 41.61 0.73 100.0 GABRE-209 retained intron Peyer's patch (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 143.00 1.73 0.43 100.0 RPL13A-212 retained intron Peyer's patch (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 306.00 3.71 0.92 100.0 RPL13A-212 retained intron Peyer's patch (Tissue)