ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 2383.00 2.43 7.20 100.0 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 191.00 0.19 0.58 100.0 MT-TE-201 Mt tRNA Peyer's patch (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 1177.00 37.50 3.56 100.0 MIR196A1-201 miRNA Peyer's patch (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 3392.00 28.78 10.25 100.0 MT-RNR1-201 Mt rRNA Peyer's patch (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 170.00 77.63 0.51 100.0 MIR454-201 miRNA Peyer's patch (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 283.00 61.93 0.86 100.0 MIR501-201 miRNA Peyer's patch (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1042.00 89.67 3.15 100.0 MIR769-201 miRNA Peyer's patch (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 106.00 72.60 0.32 100.0 KRTAP19-1-201 protein coding Peyer's patch (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2.00 14.29 0.01 100.0 MIR708-201 miRNA Peyer's patch (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 88.00 85.44 0.27 100.0 MIR509-3-201 miRNA Peyer's patch (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 3.00 100.00 0.01 100.0 MIR543-201 miRNA Peyer's patch (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 18.00 94.74 0.05 100.0 MIR301B-201 miRNA Peyer's patch (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 855.00 55.85 2.58 82.53 RNU1-82P-201 snRNA Peyer's patch (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3286.00 32.67 9.93 62.13 SNORD66-201 snoRNA Peyer's patch (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 120.00 1.19 0.36 100.0 SNORD66-201 snoRNA Peyer's patch (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1039.00 10.33 3.14 100.0 SNORD66-201 snoRNA Peyer's patch (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 23.00 11.17 0.07 100.0 U3.17-201 snoRNA Peyer's patch (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 4299.00 85.71 12.99 100.0 SNORD17-201 snoRNA Peyer's patch (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 265.00 61.34 0.80 100.0 SNORD72-201 snoRNA Peyer's patch (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1541.00 70.30 4.66 100.0 SNORD70B-201 snoRNA Peyer's patch (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2690.00 69.47 8.13 95.46 RNY4P18-201 misc RNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 43861.00 71.11 132.51 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 5117.00 8.30 15.46 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 6675.00 10.82 20.17 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 904.00 1.47 2.73 100.0 SNORD69-201 snoRNA Peyer's patch (Tissue)