ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 105.00 92.11 0.32 100.0 MIR301A-201 miRNA Peyer's patch (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 185.00 6.91 0.56 41.67 MIR130A-201 miRNA Peyer's patch (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 2471.00 92.30 7.47 97.02 MIR130A-201 miRNA Peyer's patch (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 233931.00 98.00 706.76 98.44 MIRLET7F2-201 miRNA Peyer's patch (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 336.00 75.51 1.02 100.0 MIR652-201 miRNA Peyer's patch (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 5.00 71.43 0.02 100.0 MIR653-201 miRNA Peyer's patch (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3823.00 78.57 11.55 100.0 MIR140-201 miRNA Peyer's patch (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 56.00 4.03 0.17 100.0 MIR106B-201 miRNA Peyer's patch (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 525.00 37.74 1.59 59.46 MIR106B-201 miRNA Peyer's patch (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 2645.00 72.29 7.99 100.0 SNORD41-201 snoRNA Peyer's patch (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 7441.00 11.06 22.48 100.0 MT-TF-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 23201.00 34.47 70.10 61.59 MT-TF-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 436.00 0.65 1.32 10.01 MT-TF-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 12350.00 50.62 37.31 100.0 MT-TV-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3241.00 6.39 9.79 81.6 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1184.00 2.34 3.58 100.0 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 108.00 0.21 0.33 100.0 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 5085.00 10.03 15.36 86.86 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 76.00 0.15 0.23 100.0 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 665.00 1.31 2.01 100.0 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 147.00 0.29 0.44 100.0 MT-RNR2-201 Mt rRNA Peyer's patch (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 2678.00 53.39 8.09 97.63 MT-TI-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 605.00 12.06 1.83 100.0 MT-TI-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 40751.00 55.30 123.12 86.97 MT-TQ-201 Mt tRNA Peyer's patch (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 6141.46 8.33 18.55 60.58 MT-TQ-201 Mt tRNA Peyer's patch (Tissue)