ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 129.00 69.73 0.55 100.0 SNORD14D-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 22.00 4.51 0.09 100.0 Y_RNA.555-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 3680.00 93.35 15.67 94.94 MIR25-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 115131.00 96.87 490.26 99.34 MIR99B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 12773.00 31.71 54.39 75.78 MIR23B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 26316.00 65.33 112.06 85.83 MIR23B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 58.00 40.28 0.25 100.0 MIR203A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 3846.00 85.73 16.38 90.54 MIR199B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 128.00 2.85 0.55 100.0 MIR199B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 2986.00 96.92 12.72 100.0 MIR30B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1220.00 95.84 5.20 100.0 MIR181D-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 63.00 92.65 0.27 100.0 MIR215-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 321.00 0.98 1.37 100.0 MIR181A2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 187470.00 99.30 798.30 99.61 MIR191-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 85.00 72.03 0.36 75.22 MIR149-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 574.00 89.69 2.44 98.97 MIR181C-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 41.00 6.41 0.17 100.0 MIR181C-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 17.00 62.96 0.07 100.0 MIR194-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 326.00 81.70 1.39 84.9 MIR128-2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 2494.00 82.83 10.62 87.85 MIR99A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 411757.00 92.49 1753.37 94.09 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1531.00 0.34 6.52 87.49 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 3335.00 0.75 14.20 100.0 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 21.00 80.77 0.09 100.0 MIR183-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1810.00 4.06 7.71 100.0 MIR145-201 miRNA gastroesophageal sphincter (Tissue)