ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 16.00 59.26 0.07 100.0 Y_RNA.105-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 14.00 3.93 0.06 100.0 RNY4P9-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 2.00 0.07 0.01 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 871.00 28.76 3.71 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 6.00 0.20 0.03 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 457.00 15.09 1.95 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 13.00 0.43 0.06 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 3090.00 87.76 13.16 97.17 SNORD115-18-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 12.00 0.65 0.05 92.31 RNY4P27-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 79.00 4.26 0.34 98.75 RNY4P27-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 479.00 13.48 2.04 100.0 Y_RNA.136-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 284.00 46.33 1.21 100.0 SNORD115-41-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 47.00 33.10 0.20 100.0 SNORD115-33-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1772.00 88.25 7.55 96.36 SNORD114-25-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1737.00 93.19 7.40 100.0 SNORD113-7-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 209.00 40.50 0.89 100.0 Y_RNA.181-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 75.00 19.18 0.32 100.0 SNORD115-16-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 80.00 30.42 0.34 100.0 SNORD115-32-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 40.00 27.03 0.17 100.0 SNORD115-30-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 10.00 0.11 0.04 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 387.00 4.36 1.65 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 2912.54 32.84 12.40 83.57 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 373.12 4.21 1.59 16.4 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 550.00 6.20 2.34 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 145.00 25.26 0.62 100.0 SNORD115-42-201 snoRNA gastroesophageal sphincter (Tissue)