ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 305.00 33.26 1.30 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 352.00 1.08 1.50 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 2312.00 7.08 9.85 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 160.00 0.49 0.68 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 76.00 0.23 0.32 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 312.00 0.96 1.33 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 134.00 0.41 0.57 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 22252.00 7.98 94.75 93.26 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 176.00 0.06 0.75 59.46 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 161.00 0.06 0.69 73.52 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1968.00 38.45 8.38 90.86 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2747.00 96.08 11.70 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 34.00 2.85 0.14 60.71 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 47.00 100.00 0.20 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1553.00 9.29 6.61 97.86 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 34.00 0.20 0.14 2.14 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 6127.00 36.65 26.09 91.76 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 509.71 11.37 2.17 31.54 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 169.00 3.77 0.72 82.44 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1426.45 31.82 6.07 76.53 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 51699.00 93.65 220.15 97.06 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 286.00 2.47 1.22 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1510.00 12.62 6.43 70.99 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 210.00 0.19 0.89 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1060.00 0.23 4.51 88.48 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA gastroesophageal sphincter (Tissue)