ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 656.00 5.84 2.79 91.11 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 104.00 0.93 0.44 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 5709.00 47.54 24.31 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1275.00 10.62 5.43 45.78 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 2228.00 27.95 9.49 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 56.00 0.22 0.24 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 38.00 0.15 0.16 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 338.00 1.31 1.44 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 22304.00 86.12 94.98 95.21 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 262.00 1.01 1.12 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1730.00 23.20 7.37 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 4570.00 48.28 19.46 93.34 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 313.00 5.84 1.33 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 536.00 19.92 2.28 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 194.00 7.21 0.83 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 92.00 3.42 0.39 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 79.00 2.94 0.34 28.21 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 1712.00 0.61 7.29 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 235.00 24.25 1.00 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 5.00 1.05 0.02 71.43 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 2.00 0.42 0.01 28.57 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1134.00 15.48 4.83 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 17.00 0.23 0.07 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1609.00 73.50 6.85 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 473.00 60.80 2.01 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA gastroesophageal sphincter (Tissue)