ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1547.64 16.85 6.59 33.79 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 1903.00 20.72 8.10 61.11 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 31088.00 88.83 132.38 96.61 MIR181A1HG-212 lncRNA gastroesophageal sphincter (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 21.00 0.06 0.09 100.0 MIR181A1HG-212 lncRNA gastroesophageal sphincter (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 19.00 22.09 0.08 100.0 C19orf48P-218 lncRNA gastroesophageal sphincter (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 26.00 30.23 0.11 100.0 C19orf48P-218 lncRNA gastroesophageal sphincter (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 3989.00 73.76 16.99 94.19 SNHG18-220 lncRNA gastroesophageal sphincter (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 504.00 25.86 2.15 100.0 ENST00000817026 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 153.52 2.73 0.65 63.7 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 7.00 0.12 0.03 100.0 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 107.00 1.90 0.46 47.34 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 20.00 0.36 0.09 100.0 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 1541.00 27.38 6.56 98.53 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 201.47 3.58 0.86 56.59 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 111.29 1.98 0.47 26.75 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 97.00 1.72 0.41 81.51 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 46.83 0.83 0.20 20.1 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 196.41 3.49 0.84 75.54 ENST00000823801 lncRNA gastroesophageal sphincter (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1542.00 68.81 6.57 88.88 ENST00000827714 lncRNA gastroesophageal sphincter (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 193.00 8.61 0.82 11.12 ENST00000827714 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 894.00 3.36 3.81 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 4.00 0.02 0.02 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1347.00 5.06 5.74 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 23049.00 86.66 98.15 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 5.00 41.67 0.02 100.0 MIR205HG-245 lncRNA gastroesophageal sphincter (Tissue)