ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 27418.00 80.60 116.75 96.28 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 644.00 1.89 2.74 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 744.00 43.61 3.17 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 9.00 0.53 0.04 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 138.00 11.85 0.59 100.0 ENST00000773843 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 63.00 0.02 0.27 100.0 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 153594.00 53.14 654.04 94.43 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 133574.00 46.22 568.79 98.52 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 17117.00 1.16 72.89 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1240333.00 83.93 5281.67 86.96 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 966.00 0.07 4.11 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 679.49 0.05 2.89 55.56 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 980.62 0.07 4.18 65.86 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 934.46 0.06 3.98 38.58 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 16496.00 1.12 70.24 93.17 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 318.00 0.02 1.35 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 15.00 48.39 0.06 100.0 ENST00000778783 lncRNA gastroesophageal sphincter (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 359.00 79.96 1.53 82.34 MIR155HG-205 lncRNA gastroesophageal sphincter (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 48.00 80.00 0.20 100.0 ENST00000784740 lncRNA gastroesophageal sphincter (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 93.00 2.39 0.40 100.0 ENST00000785178 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 456.00 2.70 1.94 86.69 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 4949.00 29.27 21.07 100.0 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 70.00 0.41 0.30 17.11 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 211.00 11.57 0.90 72.76 ENST00000788343 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2269.25 24.71 9.66 49.55 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)