ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 12.00 0.75 0.05 100.0 ENST00000753088 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 842.60 0.93 3.59 33.45 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 5494.00 6.09 23.39 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 4342.00 4.82 18.49 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 583.00 0.65 2.48 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1870.67 2.07 7.97 35.95 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 4609.69 5.11 19.63 75.71 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 9221.36 10.23 39.27 35.58 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 401.58 0.45 1.71 38.61 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 11422.00 12.67 48.64 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 22137.58 24.55 94.27 70.19 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 8.00 0.95 0.03 100.0 ENST00000756452 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 2951.00 26.49 12.57 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 702.00 6.30 2.99 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 82422.00 87.26 350.98 91.33 SNHG14-356 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 4030.00 12.66 17.16 81.51 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 108.00 0.34 0.46 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 3.00 0.01 0.01 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 16921.00 53.14 72.05 85.51 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 4067.00 96.60 17.32 100.0 EHBP1-AS1-210 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 787.00 13.35 3.35 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 3694.00 62.66 15.73 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 381.00 6.46 1.62 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 1139.00 3.35 4.85 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 43.00 0.13 0.18 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)