ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 354.00 62.88 1.51 100.0 MEG8-242 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 1354.41 23.52 5.77 30.76 SNHG14-312 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 2933.16 50.93 12.49 66.62 SNHG14-312 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 55.00 0.11 0.23 100.0 MEG8-244 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 285.00 0.59 1.21 100.0 MEG8-244 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 47365.00 98.17 201.69 99.63 MEG8-244 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 173.00 0.01 0.74 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 5.00 0.00 0.02 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 1511.00 0.11 6.43 98.18 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2347.07 0.17 9.99 62.99 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1124.00 0.08 4.79 79.43 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 660034.00 48.87 2810.60 99.76 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 698.00 0.05 2.97 74.49 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 18953.00 1.40 80.71 99.24 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 2393.00 0.18 10.19 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 174680.00 12.93 743.83 99.9 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 570.00 0.04 2.43 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 46.00 0.00 0.20 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 313.00 0.02 1.33 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 165.00 0.01 0.70 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 1123.00 0.08 4.78 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 256.00 0.02 1.09 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 7953.00 0.59 33.87 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 168.00 0.01 0.72 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 378.00 0.03 1.61 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)