ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 70.00 1.59 0.30 100.0 HSPA9-211 retained intron gastroesophageal sphincter (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1157.00 26.36 4.93 46.39 HSPA9-211 retained intron gastroesophageal sphincter (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 3196.00 88.93 13.61 100.0 DNM3OS-205 lncRNA gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 1286.00 0.35 5.48 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 135.00 0.04 0.57 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 240.00 0.06 1.02 87.59 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 3215.00 0.87 13.69 84.63 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 4.00 0.00 0.02 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 96.00 0.03 0.41 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 147.00 0.04 0.63 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 203320.00 55.01 865.79 99.87 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 126.00 0.03 0.54 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 596.00 0.16 2.54 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 506.00 0.14 2.15 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 343.00 0.09 1.46 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 560.00 0.15 2.38 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 2.00 0.00 0.01 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 170.00 0.05 0.72 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 407.00 0.11 1.73 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 4899.00 1.33 20.86 83.61 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 1791.00 0.48 7.63 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 7945.00 2.15 33.83 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 4140.00 1.12 17.63 80.7 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 14849.00 4.02 63.23 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 187.00 0.05 0.80 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)