ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 72.00 0.43 0.31 24.08 ENST00000619323 lncRNA gastroesophageal sphincter (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 15937.00 94.25 67.86 96.65 ENST00000619323 lncRNA gastroesophageal sphincter (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 182.00 21.80 0.78 100.0 SCARNA4-202 scaRNA gastroesophageal sphincter (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1918.00 71.67 8.17 100.0 ENST00000625572 miRNA gastroesophageal sphincter (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 7138.00 92.59 30.40 100.0 ENST00000628177 snoRNA gastroesophageal sphincter (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 590.00 90.35 2.51 100.0 ENST00000630615 snoRNA gastroesophageal sphincter (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 672.00 69.78 2.86 100.0 DMRT2-209 protein coding gastroesophageal sphincter (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 16.00 1.66 0.07 100.0 DMRT2-209 protein coding gastroesophageal sphincter (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 223.00 30.46 0.95 100.0 SNORD98-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 352.00 48.09 1.50 100.0 SNORD98-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 58184.12 62.02 247.76 63.33 MIR106AHG-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 11.25 0.01 0.05 27.44 MIR106AHG-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 9.00 0.01 0.04 100.0 MIR106AHG-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 26.41 0.03 0.11 64.42 MIR106AHG-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 554.00 51.20 2.36 100.0 MEG8-222 lncRNA gastroesophageal sphincter (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 292.00 26.99 1.24 100.0 MEG8-222 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 5832.00 11.47 24.83 98.41 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 21188.00 41.68 90.22 93.65 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 7000.00 13.77 29.81 100.0 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 6981.00 13.73 29.73 89.74 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 101.00 0.20 0.43 100.0 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 511.00 1.01 2.18 44.86 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1389.00 2.73 5.91 70.36 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1184.00 2.33 5.04 63.28 SNHG14-224 lncRNA gastroesophageal sphincter (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2765.56 7.13 11.78 46.83 5S_rRNA.20-201 rRNA pseudogene gastroesophageal sphincter (Tissue)