ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 1.00 50.00 0.00 100.0 MIR450B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 58.00 33.72 0.25 100.0 MIR887-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 2570.00 74.73 10.94 100.0 SNORD111-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 718.00 61.21 3.06 76.22 SNORD88A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 6.00 75.00 0.03 100.0 MIR548K-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 404.00 60.66 1.72 100.0 MIR320B2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 61.00 84.72 0.26 100.0 MIR1271-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 41685.00 83.40 177.51 100.0 SNORD100-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 3348.00 6.70 14.26 100.0 SNORD100-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 1346.00 2.69 5.73 100.0 SNORD100-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 589.00 1.18 2.51 100.0 SNORD100-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2271.00 71.94 9.67 100.0 SNORD111B-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 205.00 7.21 0.87 100.0 RNU2-36P-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 437.00 15.37 1.86 100.0 RNU2-36P-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 26979.00 97.19 114.88 98.99 SNORD19C-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 219.00 0.79 0.93 100.0 SNORD19C-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 154.00 1.05 0.66 100.0 SNORD12B-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 12185.00 83.30 51.89 95.64 SNORD12B-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 995.00 6.80 4.24 100.0 SNORD12B-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 21.00 4.11 0.09 100.0 Y_RNA.609-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 27.00 22.69 0.11 100.0 Y_RNA.612-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 1912.00 0.49 8.14 100.0 SNORD71-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 134.00 0.03 0.57 100.0 SNORD71-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 387450.00 98.62 1649.87 99.88 SNORD71-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 449.00 21.35 1.91 58.31 MIR194-2HG-201 lncRNA gastroesophageal sphincter (Tissue)