ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1340.00 1.18 5.71 100.0 MIR27B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 1.00 100.00 0.00 100.0 MIR196A2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 6.00 100.00 0.03 100.0 MIR577-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 54.00 55.10 0.23 81.82 MIR654-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 465.00 96.27 1.98 98.73 MIR204-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 2300.00 95.32 9.79 100.0 MIR152-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 6.00 85.71 0.03 100.0 MIR138-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 2847.00 91.13 12.12 100.0 MIR30C1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 16.00 59.26 0.07 100.0 MIR660-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 2523.00 10.38 10.74 100.0 MIR125B1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 15807.00 65.03 67.31 79.3 MIR125B1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 6.00 46.15 0.03 100.0 MIR493-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 5.00 38.46 0.02 100.0 MIR493-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 78.81 21.13 0.34 26.62 MIR182-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 212.39 56.94 0.90 59.49 MIR182-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 37873.00 90.51 161.27 91.92 MIR100-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 50.00 96.15 0.21 100.0 MIR301A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 2673.00 90.27 11.38 96.29 MIR130A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 267.00 9.02 1.14 34.63 MIR130A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 113410.00 98.48 482.93 98.93 MIRLET7F2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 250.00 89.61 1.06 100.0 MIR652-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 3.00 100.00 0.01 100.0 MIR653-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1238.00 77.18 5.27 100.0 MIR140-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 15.00 6.73 0.06 100.0 MIR106B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 45.00 20.18 0.19 67.16 MIR106B-201 miRNA gastroesophageal sphincter (Tissue)