ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1810.00 4.06 7.71 100.0 MIR145-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 6320.00 97.64 26.91 98.67 MIR186-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 15.00 78.95 0.06 100.0 MIR200B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 40.00 11.59 0.17 100.0 MIR218-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 2428.00 94.40 10.34 97.9 MIR181B2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 2.00 40.00 0.01 100.0 MIR495-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 623080.00 87.43 2653.24 87.86 MIR10B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 6.00 6.74 0.03 100.0 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 22.68 25.48 0.10 44.47 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 50.24 56.45 0.21 62.8 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 239.00 5.16 1.02 100.0 MIR199A1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 7.00 87.50 0.03 100.0 MIR487B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 200.56 25.13 0.85 29.84 MIR93-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 538.51 67.48 2.29 70.49 MIR93-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 421.00 80.50 1.79 98.14 MIR532-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 56.00 82.35 0.24 100.0 MIR15B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 480.00 83.33 2.04 100.0 MIR150-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 16.00 72.73 0.07 100.0 MIR542-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 20.00 5.28 0.09 100.0 MIR500A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 269.00 70.98 1.15 100.0 MIR500A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 13902.00 61.74 59.20 97.09 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 1901.00 8.44 8.09 100.0 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 128.00 0.57 0.55 100.0 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 5882.00 26.12 25.05 93.38 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1340.00 1.18 5.71 100.0 MIR27B-201 miRNA gastroesophageal sphincter (Tissue)