ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 224.00 31.68 1.49 100.0 SNORD115-42-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 19411.05 6.81 129.35 38.53 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1204.00 0.42 8.02 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 754.00 0.26 5.02 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 8691.00 3.05 57.91 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 687.00 0.24 4.58 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 245.00 0.09 1.63 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 1715.56 0.60 11.43 62.52 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1227.00 0.43 8.18 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1492.59 0.52 9.95 47.69 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1706.00 54.38 11.37 100.0 SNORD114-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1006.00 32.07 6.70 100.0 SNORD114-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 3745.00 33.41 24.96 100.0 Y_RNA.234-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 42.00 0.02 0.28 100.0 RNA5S9-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 37.00 86.05 0.25 100.0 SNORD115-23-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 59.00 2.26 0.39 100.0 RNA5SP141-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 252.00 84.00 1.68 100.0 SNORD114-15-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 33.00 24.26 0.22 100.0 ENST00000364722 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 320.00 39.02 2.13 100.0 SNORD115-15-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 75.00 38.07 0.50 100.0 SNORD113-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 1571.00 66.51 10.47 100.0 SNORD52-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 1235.00 45.72 8.23 83.56 SNORD117-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 243.00 9.00 1.62 23.28 SNORD117-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 532.00 24.55 3.55 100.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 1297.00 59.85 8.64 96.79 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)