ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 61.00 1.82 0.41 48.41 RNA5SP145-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 8.00 36.36 0.05 100.0 Y_RNA.105-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 15.00 1.66 0.10 100.0 RNY4P9-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1789.00 18.63 11.92 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 95.00 0.99 0.63 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 2593.00 27.00 17.28 100.0 RNU5B-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 6943.00 87.17 46.27 98.26 SNORD115-18-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 48.00 1.81 0.32 97.96 RNY4P27-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 7.00 0.26 0.05 87.5 RNY4P27-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 226.00 7.73 1.51 100.0 Y_RNA.136-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 266.00 40.06 1.77 100.0 SNORD115-41-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 8.00 1.71 0.05 100.0 SNORD115-5-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 46.00 25.14 0.31 100.0 SNORD115-33-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 2396.00 89.40 15.97 98.04 SNORD114-25-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 858.00 83.71 5.72 100.0 SNORD113-7-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 84.00 26.17 0.56 100.0 SNORD115-8-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 98.00 32.56 0.65 100.0 Y_RNA.181-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 80.00 17.82 0.53 100.0 SNORD115-16-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 104.00 25.49 0.69 100.0 SNORD115-32-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 35.00 19.55 0.23 100.0 SNORD115-30-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 50.00 0.88 0.33 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 47.00 0.83 0.31 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1053.49 18.63 7.02 81.16 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 174.99 3.09 1.17 20.25 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 24.00 0.42 0.16 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)