ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1468.00 25.31 9.78 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1106.00 19.07 7.37 55.22 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 699.00 14.28 4.66 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 159.00 3.69 1.06 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 43.00 1.00 0.29 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 195.00 4.53 1.30 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 263.00 6.11 1.75 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1507.00 35.00 10.04 94.78 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 570.00 12.40 3.80 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 744.00 16.04 4.96 80.87 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 129.00 3.32 0.86 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 214.00 17.46 1.43 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 24.00 1.96 0.16 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 12.00 0.98 0.08 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 18.00 1.47 0.12 20.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 576.00 0.92 3.84 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 92.00 15.78 0.61 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 418.00 4.81 2.79 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 16.00 0.18 0.11 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 300.00 73.17 2.00 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 554.00 73.38 3.69 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 34.00 8.79 0.23 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 254.00 0.52 1.69 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1555.00 3.18 10.36 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 102.00 0.21 0.68 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)