ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 86.00 0.13 0.57 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 71.00 0.11 0.47 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 190.00 0.30 1.27 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 25.00 56.82 0.17 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 100.00 0.22 0.67 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 27.00 4.27 0.18 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 111.00 17.56 0.74 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 19.00 2.49 0.13 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 85.00 1.85 0.57 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 12.00 0.03 0.08 8.16 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 20.00 0.04 0.13 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 615.00 24.91 4.10 67.96 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 453.00 18.35 3.02 42.42 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 82.00 3.13 0.55 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2476.00 3.89 16.50 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 28480.00 44.71 189.78 89.85 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 50.00 14.75 0.33 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 38.00 2.89 0.25 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 160.00 0.33 1.07 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 103.00 1.51 0.69 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 29.00 0.43 0.19 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 151.00 2.22 1.01 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 92.00 1.35 0.61 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1248.00 18.34 8.32 94.98 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 158.00 2.32 1.05 24.27 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus muscularis mucosa (Tissue)