ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 5.00 1.12 0.03 100.0 RNU5E-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 5.00 0.14 0.03 45.45 RNA5SP370-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 52.00 7.84 0.35 100.0 SNORA31-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 73.00 2.10 0.49 100.0 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 56.00 1.61 0.37 52.34 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 20.00 0.57 0.13 24.69 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2619.00 6.02 17.45 69.19 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 10.00 0.02 0.07 100.0 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 890.96 2.05 5.94 52.07 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 4983.00 11.44 33.21 78.94 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2469.00 5.67 16.45 70.18 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 215.00 0.49 1.43 100.0 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 3014.00 6.92 20.08 73.98 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 4525.00 10.39 30.15 72.4 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1720.28 3.95 11.46 61.18 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2585.00 5.94 17.23 62.44 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 895.01 2.06 5.96 63.93 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1411.91 3.24 9.41 38.61 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4987.00 11.45 33.23 60.32 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 2124.00 4.88 14.15 49.1 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 528.00 78.69 3.52 100.0 SNORD114-14-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 729.00 3.33 4.86 100.0 SNORD104-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 64.00 0.29 0.43 100.0 SNORD104-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 998.00 57.13 6.65 91.9 SNORD115-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 168661.00 68.25 1123.92 80.8 RNA5SP358-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)