ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 611.65 0.53 4.08 35.31 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 1219.50 1.06 8.13 64.02 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 9436.61 8.18 62.88 29.49 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 425.45 0.37 2.84 47.22 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 23658.00 20.52 157.65 100.0 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 43280.14 37.54 288.41 82.84 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 13.00 2.96 0.09 100.0 ENST00000756452 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 357.00 10.96 2.38 100.0 ENST00000760093 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 53.00 1.63 0.35 100.0 ENST00000760093 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 32066.00 90.56 213.68 95.92 SNHG14-356 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 1822.00 11.14 12.14 90.42 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 93.00 0.57 0.62 100.0 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 28.00 0.17 0.19 100.0 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 1605.00 9.82 10.70 77.87 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 49.00 0.30 0.33 100.0 LINC02806-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 4905.00 96.80 32.69 100.0 EHBP1-AS1-210 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 721.00 15.69 4.80 100.0 ENST00000770398 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 2738.00 59.59 18.25 100.0 ENST00000770398 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 75.00 1.63 0.50 100.0 ENST00000770398 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 799.00 10.79 5.32 100.0 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 27.00 0.36 0.18 100.0 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 3169.00 42.81 21.12 97.03 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 93.00 1.26 0.62 100.0 ENST00000771298 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 356.00 45.35 2.37 100.0 ENST00000772672 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 3.00 0.38 0.02 100.0 ENST00000772672 lncRNA esophagus muscularis mucosa (Tissue)