ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 24.00 47.06 0.16 100.0 MT-TD-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 135.00 0.71 0.90 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 45.00 0.24 0.30 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 8495.00 44.93 56.61 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 6921.00 36.61 46.12 100.0 MT-TK-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 33.00 2.23 0.22 100.0 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 175.00 11.84 1.17 94.59 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 80.00 5.41 0.53 100.0 MT-TS2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 55.00 9.03 0.37 100.0 MT-TL2-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 30545.00 78.37 203.55 91.05 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 405.00 1.04 2.70 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 9.00 0.02 0.06 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 26.00 0.07 0.17 100.0 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 445.00 1.14 2.97 90.45 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 199.00 0.51 1.33 82.57 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 42.00 0.11 0.28 21.32 MT-TE-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 95.00 10.35 0.63 100.0 MT-RNR1-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 17.00 1.85 0.11 100.0 MT-RNR1-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 83.00 77.57 0.55 100.0 MIR454-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 388.00 73.48 2.59 100.0 MIR501-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 373.00 88.60 2.49 100.0 MIR769-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 447.00 70.39 2.98 100.0 KRTAP19-1-201 protein coding esophagus muscularis mucosa (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 8.00 16.00 0.05 100.0 MIR708-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 15.00 100.00 0.10 100.0 MIR509-3-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 1.00 100.00 0.01 100.0 MIR301B-201 miRNA esophagus muscularis mucosa (Tissue)