ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 9.00 0.22 0.06 100.0 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 102.00 2.49 0.68 62.58 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 353.00 21.79 2.35 100.0 MT-TV-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 47.00 0.74 0.31 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 563.00 8.87 3.75 95.75 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 30.00 0.47 0.20 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 160.00 2.52 1.07 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 41.00 0.65 0.27 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 210.00 3.31 1.40 73.17 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 97.00 1.53 0.65 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 49.00 16.67 0.33 100.0 MT-TI-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 50.00 17.01 0.33 100.0 MT-TI-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2564.13 7.58 17.09 58.8 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 3099.48 9.16 20.65 48.54 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 11.00 0.03 0.07 100.0 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 20206.00 59.72 134.65 89.15 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 54.00 4.09 0.36 100.0 MT-TM-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 236.00 17.88 1.57 30.65 MT-TM-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 196.00 50.52 1.31 100.0 MT-TC-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 463.00 1.76 3.09 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 5277.00 20.01 35.16 91.03 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 45.00 0.17 0.30 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 3467.00 13.15 23.10 85.25 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 8.00 0.03 0.05 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 14949.00 56.69 99.62 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)