ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 59.00 0.53 0.43 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 12713.00 95.63 91.67 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 808.00 70.94 5.83 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1031.00 32.25 7.43 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 690.00 0.37 4.98 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 151.00 0.08 1.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 383.00 0.20 2.76 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1912.00 1.02 13.79 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 564.00 0.30 4.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 397.00 0.21 2.86 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 239.00 0.04 1.72 70.29 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 345.00 0.05 2.49 60.31 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 39176.00 5.81 282.49 94.13 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 4257.00 40.28 30.70 82.4 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 786.00 93.91 5.67 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 180.00 26.05 1.30 88.67 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 421.00 96.78 3.04 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 2404.00 7.65 17.34 90.41 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 255.00 0.81 1.84 9.59 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 19148.00 60.93 138.07 88.97 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 4514.35 47.14 32.55 81.46 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 1309.23 13.67 9.44 25.57 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 295.00 3.08 2.13 62.5 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 118484.00 95.72 854.38 97.77 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 57.00 0.71 0.41 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA upper lobe of left lung (Tissue)