ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 7.00 0.01 0.05 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 31312.21 30.83 225.79 34.83 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 140.00 0.14 1.01 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 67506.20 66.47 486.78 70.45 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 1196.00 1.18 8.62 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 246.00 0.24 1.77 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 44.00 0.04 0.32 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 141.00 0.14 1.02 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 18240.00 4.16 131.53 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1563.00 0.36 11.27 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 34.00 0.01 0.25 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 8928.00 2.04 64.38 87.15 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 406240.00 92.60 2929.36 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 45182.00 93.46 325.80 98.71 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1372.00 2.84 9.89 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 29.00 0.06 0.21 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 554.00 76.94 3.99 100.0 B4GALT1-203 nonsense mediated decay upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 772.00 2.75 5.57 100.0 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 2770.00 9.88 19.97 81.52 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 650.00 2.32 4.69 100.0 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 135.00 43.55 0.97 100.0 MIR34BHG-202 lncRNA upper lobe of left lung (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 5820.00 72.80 41.97 78.6 THBS3-AS1-228 lncRNA upper lobe of left lung (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 5302.00 78.01 38.23 100.0 MIR200CHG-202 lncRNA upper lobe of left lung (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 371.00 5.46 2.68 100.0 MIR200CHG-202 lncRNA upper lobe of left lung (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1612.00 37.37 11.62 100.0 SNHG16-266 lncRNA upper lobe of left lung (Tissue)