ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1710.00 0.32 12.33 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 676.00 0.13 4.87 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 580.00 0.11 4.18 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 20182.00 3.80 145.53 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 227.00 0.04 1.64 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2328.00 0.44 16.79 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 86389.00 16.28 622.94 83.7 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 6.00 0.00 0.04 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 1523.00 0.29 10.98 88.44 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 39.00 0.01 0.28 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1.00 0.00 0.01 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 7855.00 1.48 56.64 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1460.00 0.28 10.53 91.48 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1381.17 0.26 9.96 42.03 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1365.00 0.26 9.84 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 681.00 0.13 4.91 64.49 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 2025.00 0.38 14.60 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 15.00 0.00 0.11 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 4498.00 5.33 32.43 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 47216.45 55.94 340.47 90.96 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 1083.00 1.28 7.81 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 118.00 0.14 0.85 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 460.31 0.55 3.32 0.89 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 13456.00 15.94 97.03 99.98 SNHG5-273 lncRNA upper lobe of left lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 41.00 0.05 0.30 100.0 SNHG5-273 lncRNA upper lobe of left lung (Tissue)