ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 254.00 0.19 1.83 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 6112.00 4.62 44.07 90.66 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 172.00 0.13 1.24 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 304.00 0.23 2.19 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 87857.00 66.44 633.53 97.8 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 21718.00 16.42 156.61 99.21 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 88.00 0.07 0.63 100.0 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 365.00 0.28 2.63 46.38 RNY4-201 misc RNA upper lobe of left lung (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 9712.00 79.20 70.03 86.96 MIR3142HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 6084.00 8.05 43.87 100.0 MIR151A-201 miRNA upper lobe of left lung (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 61164.00 80.92 441.05 89.66 MIR151A-201 miRNA upper lobe of left lung (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1116.00 99.47 8.05 100.0 DENND3-221 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 284.00 1.72 2.05 100.0 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 406.00 2.46 2.93 100.0 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 972.00 5.90 7.01 50.13 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 99.00 0.60 0.71 100.0 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 967.00 5.87 6.97 49.87 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 2849.00 17.29 20.54 83.97 WDR74-204 protein coding upper lobe of left lung (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 327.00 24.12 2.36 100.0 SCARNA9-201 lncRNA upper lobe of left lung (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 70296.00 98.19 506.90 100.0 TAF1D-215 retained intron upper lobe of left lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 5.00 1.74 0.04 100.0 HSPA8-215 retained intron upper lobe of left lung (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 369507.00 73.44 2664.48 75.35 ENST00000548801 lncRNA upper lobe of left lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1274.00 32.42 9.19 100.0 ENST00000554988 lncRNA upper lobe of left lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 356.00 9.06 2.57 100.0 ENST00000554988 lncRNA upper lobe of left lung (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 332.00 0.99 2.39 100.0 SNHG14-220 retained intron upper lobe of left lung (Tissue)