ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 79.00 44.89 0.57 100.0 MIR887-201 miRNA upper lobe of left lung (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 9.00 100.00 0.06 100.0 MIR889-201 miRNA upper lobe of left lung (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 25.00 96.15 0.18 100.0 MIR548K-201 miRNA upper lobe of left lung (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 264.00 50.09 1.90 100.0 MIR320B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 4.00 80.00 0.03 100.0 MIR1271-201 miRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2283.00 1.18 16.46 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 1070.00 0.55 7.72 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 176727.00 91.28 1274.36 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 6583.00 3.40 47.47 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3916.00 72.68 28.24 100.0 SNORD111B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 170.00 2.11 1.23 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 162.00 2.01 1.17 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 2226.00 2.65 16.05 100.0 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 80085.00 95.28 577.49 99.28 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2912.00 83.27 21.00 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 54.00 1.54 0.39 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 17.00 3.55 0.12 100.0 Y_RNA.609-201 misc RNA upper lobe of left lung (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 57.00 31.67 0.41 100.0 Y_RNA.612-201 misc RNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 581.00 29.79 4.19 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 353.00 18.10 2.55 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 7554.00 89.85 54.47 95.94 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 793.00 9.43 5.72 41.32 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 28.00 90.32 0.20 100.0 RPS7P15-201 processed pseudogene upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 321.00 9.01 2.31 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 568.00 15.95 4.10 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)