ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 393.00 10.24 1.20 100.0 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 30.00 0.78 0.09 100.0 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 69.00 9.70 0.21 100.0 RNA5SP298-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 188.00 36.36 0.58 100.0 SNORD115-38-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 510.00 41.23 1.56 100.0 SNORD115-10-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 678.00 77.22 2.08 100.0 SNORD113-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 15.00 25.42 0.05 100.0 SNORD115-20-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 20065.00 88.63 61.50 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 513.00 2.27 1.57 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1104.00 4.88 3.38 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 3904.00 90.92 11.97 97.58 SNORD114-20-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 245.00 14.51 0.75 86.57 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 149.00 8.83 0.46 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 97.00 5.75 0.30 58.79 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 10.00 0.59 0.03 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 21.00 1.24 0.06 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 25.00 1.48 0.08 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 133.00 7.88 0.41 77.78 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1476.00 70.49 4.52 100.0 SNORD14C-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 209.00 46.14 0.64 100.0 SNORD115-44-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 2162.00 93.39 6.63 100.0 RNA5SP77-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 11559.00 83.09 35.43 100.0 SNORD114-22-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1986.00 14.28 6.09 94.66 SNORD114-22-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 9952.00 88.98 30.50 100.0 SNORD6-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 338.00 3.02 1.04 100.0 SNORD6-201 snoRNA gastroesophageal sphincter (Tissue)