ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 101.00 1.52 0.31 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 323.00 32.66 0.99 100.0 SNORD115-42-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1879.38 2.54 5.76 39.06 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 536.00 0.73 1.64 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 113.00 0.15 0.35 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 4094.00 5.54 12.55 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 285.00 0.39 0.87 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 206.00 0.28 0.63 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 4319.69 5.85 13.24 56.67 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 118.00 0.16 0.36 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 5850.94 7.92 17.93 64.63 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 491.00 8.65 1.50 100.0 SNORD114-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 4794.00 84.46 14.69 100.0 SNORD114-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 7817.00 11.40 23.96 100.0 Y_RNA.234-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 6621.00 16.77 20.29 100.0 RNA5S9-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 149.00 63.14 0.46 100.0 SNORD115-23-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 42.00 2.51 0.13 100.0 RNA5SP141-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 956.00 92.82 2.93 100.0 SNORD114-15-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 34.00 15.18 0.10 100.0 ENST00000364722 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 434.00 37.38 1.33 100.0 SNORD115-15-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 247.00 52.11 0.76 100.0 SNORD113-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 9201.00 87.06 28.20 100.0 SNORD52-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 4708.00 68.62 14.43 89.93 SNORD117-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 527.00 7.68 1.62 18.34 SNORD117-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 3005.00 78.28 9.21 95.76 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)