ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 99.00 3.04 0.30 58.93 RNA5SP145-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 2.00 22.22 0.01 100.0 Y_RNA.105-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 11.00 3.01 0.03 100.0 RNY4P9-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 2.00 0.12 0.01 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 525.00 32.81 1.61 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 6.00 0.38 0.02 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 224.00 14.00 0.69 100.0 RNU5B-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 5615.00 86.76 17.21 95.84 SNORD115-18-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 2.00 0.09 0.01 100.0 RNY4P27-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 82.00 3.70 0.25 100.0 RNY4P27-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 306.00 4.90 0.94 100.0 Y_RNA.136-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 538.00 49.68 1.65 100.0 SNORD115-41-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 8.00 1.41 0.02 100.0 SNORD115-5-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 114.00 46.15 0.35 100.0 SNORD115-33-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1436.00 87.45 4.40 95.04 SNORD114-25-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 2051.00 93.95 6.29 100.0 SNORD113-7-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 75.00 19.08 0.23 100.0 SNORD115-8-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 107.00 15.76 0.33 100.0 Y_RNA.181-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 151.00 22.71 0.46 100.0 SNORD115-16-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 156.00 33.69 0.48 100.0 SNORD115-32-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 123.00 44.40 0.38 100.0 SNORD115-30-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 78.00 1.17 0.24 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1830.04 27.51 5.61 81.77 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 274.78 4.13 0.84 18.37 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 101.00 1.52 0.31 100.0 RNY1-201 misc RNA gastroesophageal sphincter (Tissue)