ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 3927.00 28.58 12.04 100.0 ZFAS1-242 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 9065.00 65.98 27.78 100.0 ZFAS1-242 lncRNA gastroesophageal sphincter (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 659.00 36.01 2.02 100.0 ENST00000837997 lncRNA gastroesophageal sphincter (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 700.00 38.25 2.15 100.0 ENST00000837997 lncRNA gastroesophageal sphincter (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4293.00 66.96 13.16 72.62 ENST00000839036 lncRNA gastroesophageal sphincter (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 104.00 15.59 0.32 100.0 ENST00000849527 lncRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 11154.00 79.98 34.19 90.91 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 79.00 0.57 0.24 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 84.00 0.17 0.26 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 430.00 38.95 1.32 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 48.00 4.35 0.15 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 207.00 19.79 0.63 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 127.00 2.00 0.39 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1208.00 50.17 3.70 84.06 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 352.00 0.70 1.08 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 2.00 9.09 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 693.00 3.92 2.12 86.95 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 12962.00 73.34 39.73 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 683.00 24.80 2.09 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 667.00 0.30 2.04 85.19 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 601.00 0.27 1.84 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 332.00 0.15 1.02 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 743.00 0.34 2.28 92.07 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 46120.00 21.02 141.35 49.39 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)