ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1673.00 16.26 5.13 87.45 MIR126-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 8050.00 78.22 24.67 100.0 MIR126-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 12.00 25.00 0.04 100.0 MIR374A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 2.00 28.57 0.01 100.0 MIR31-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 39723.00 2.41 121.75 77.44 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 288.00 0.02 0.88 98.97 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 65.00 0.00 0.20 46.43 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 33.00 0.00 0.10 100.0 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 2469.00 0.15 7.57 49.41 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 44.00 0.00 0.13 100.0 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 2535.52 0.15 7.77 54.38 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 8869.00 0.54 27.18 85.07 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 3031.00 0.18 9.29 45.78 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1707.00 0.10 5.23 49.72 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 12.00 0.00 0.04 100.0 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 68.00 0.00 0.21 78.16 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 959.69 0.06 2.94 52.44 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 2740.16 0.17 8.40 47.26 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 2546.00 0.15 7.80 61.07 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 2317.00 0.14 7.10 57.57 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 1709.84 0.10 5.24 54.49 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 1482871.00 89.88 4544.89 99.23 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 7262.00 0.44 22.26 81.73 RNA5S12-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 60.00 4.94 0.18 100.0 Y_RNA.14-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 144.00 21.30 0.44 100.0 SNORD115-34-201 snoRNA gastroesophageal sphincter (Tissue)