ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 4122.00 71.54 12.63 100.0 DNM3OS-205 lncRNA gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 846.00 0.20 2.59 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 1217.00 0.29 3.73 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 209.00 0.05 0.64 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 290.00 0.07 0.89 82.86 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 6923.00 1.68 21.22 90.37 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 3.00 0.00 0.01 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 47.00 0.01 0.14 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 208.00 0.05 0.64 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 237869.00 57.59 729.05 99.89 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 152.00 0.04 0.47 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 836.00 0.20 2.56 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 655.00 0.16 2.01 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 279.00 0.07 0.86 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 4.00 0.00 0.01 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 123.00 0.03 0.38 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 364.00 0.09 1.12 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 4167.00 1.01 12.77 84.15 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 2633.00 0.64 8.07 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 7067.00 1.71 21.66 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 4242.00 1.03 13.00 83.26 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 15973.00 3.87 48.96 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 125.00 0.03 0.38 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 845.00 0.20 2.59 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 116846.00 28.29 358.12 100.0 GAS5-230 retained intron gastroesophageal sphincter (Tissue)