ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4505.00 82.06 13.81 100.0 SNORD41-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 58.00 2.16 0.18 71.6 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 21.00 0.78 0.06 100.0 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 890.00 33.12 2.73 61.34 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1059.00 25.30 3.25 100.0 MT-TV-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 1496.00 3.98 4.59 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1949.00 5.18 5.97 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 4633.00 12.31 14.20 82.94 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 11528.00 30.64 35.33 91.46 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 5.00 0.01 0.02 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 61.00 0.16 0.19 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 15.00 0.04 0.05 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 181.00 24.49 0.55 77.35 MT-TI-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 76.00 10.28 0.23 100.0 MT-TI-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 23679.00 46.75 72.57 87.42 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 5745.93 11.34 17.61 53.44 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 10.00 0.02 0.03 100.0 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 13063.16 25.79 40.04 66.14 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 169.00 4.68 0.52 100.0 MT-TM-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 657.00 18.18 2.01 80.32 MT-TM-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 285.00 21.35 0.87 100.0 MT-TC-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 44.00 0.10 0.13 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 7307.00 17.10 22.40 77.89 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 4.00 0.01 0.01 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 12837.00 30.04 39.34 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)