ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2406.00 12.83 7.37 100.0 MIR145-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 7741.00 97.49 23.73 98.76 MIR186-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 9.00 100.00 0.03 100.0 MIR200B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 63.00 17.17 0.19 100.0 MIR218-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 3534.00 93.49 10.83 97.71 MIR181B2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 336431.00 85.49 1031.14 86.08 MIR10B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 28.79 33.87 0.09 47.19 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 42.63 50.15 0.13 56.09 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 5.00 5.88 0.02 100.0 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1493.00 21.74 4.58 100.0 MIR199A1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 2.00 66.67 0.01 100.0 MIR487B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 450.00 52.82 1.38 55.9 MIR93-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 328.81 38.59 1.01 44.68 MIR93-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 380.00 88.99 1.16 96.94 MIR532-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 14.00 56.00 0.04 100.0 MIR15B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 367.00 76.30 1.12 100.0 MIR150-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 14.00 60.87 0.04 100.0 MIR542-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 260.00 83.87 0.80 100.0 MIR500A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 4.00 1.29 0.01 100.0 MIR500A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 15706.00 52.61 48.14 96.71 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 1896.00 6.35 5.81 100.0 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 683.00 2.29 2.09 100.0 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 10744.00 35.99 32.93 95.26 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 146983.00 91.33 450.49 94.4 MIR27B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1523.00 0.95 4.67 100.0 MIR27B-201 miRNA gastroesophageal sphincter (Tissue)