ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 816.00 13.22 5.25 90.67 MIR126-201 miRNA sigmoid colon (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 5169.00 83.74 33.25 100.0 MIR126-201 miRNA sigmoid colon (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 49.00 58.33 0.32 100.0 MIR374A-201 miRNA sigmoid colon (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 30.00 100.00 0.19 100.0 MIR31-201 miRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 2149.49 1.10 13.83 59.58 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1481.00 0.76 9.53 58.65 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 417.00 0.21 2.68 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 17.00 0.01 0.11 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 2454.00 1.25 15.79 48.52 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 912.00 0.47 5.87 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 570.00 0.29 3.67 97.1 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1604.00 0.82 10.32 47.68 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 76.00 0.04 0.49 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 2728.00 1.39 17.55 81.02 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 1285.04 0.66 8.27 48.75 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 7915.00 4.04 50.92 81.81 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 113.00 11.14 0.73 100.0 Y_RNA.14-201 misc RNA sigmoid colon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 107.00 10.67 0.69 100.0 SNORA31-201 snoRNA sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 1510.00 5.71 9.71 70.07 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1721.00 6.51 11.07 100.0 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 1210.00 4.58 7.78 31.73 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2391.00 10.98 15.38 62.41 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2261.00 10.38 14.55 64.12 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 439.17 2.02 2.83 57.03 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 3704.00 17.00 23.83 73.32 RNU5A-1-201 snRNA sigmoid colon (Tissue)