ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 87.00 98.86 0.56 98.86 MIR381-201 miRNA sigmoid colon (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 4784.00 81.72 30.78 92.09 MIR103A2-201 miRNA sigmoid colon (Tissue)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 12.00 100.00 0.08 100.0 MIR369-201 miRNA sigmoid colon (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 79.00 46.20 0.51 100.0 MIR425-201 miRNA sigmoid colon (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 31.00 18.13 0.20 100.0 MIR425-201 miRNA sigmoid colon (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 45.00 83.33 0.29 100.0 MIR210-201 miRNA sigmoid colon (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 100773.00 96.43 648.29 97.51 MIR378A-201 miRNA sigmoid colon (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 643.00 68.33 4.14 100.0 MIR361-201 miRNA sigmoid colon (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 13677.00 91.39 87.99 95.67 MIR101-2-201 miRNA sigmoid colon (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 311.00 2.08 2.00 33.44 MIR101-2-201 miRNA sigmoid colon (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 131167.00 98.32 843.82 99.16 MIR26A1-201 miRNA sigmoid colon (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 94.00 80.34 0.60 100.0 MIR129-2-201 miRNA sigmoid colon (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 482.00 69.96 3.10 100.0 MIR342-201 miRNA sigmoid colon (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 18459.00 93.07 118.75 94.05 MIR148A-201 miRNA sigmoid colon (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 78.00 0.39 0.50 100.0 MIR148A-201 miRNA sigmoid colon (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 236.00 100.00 1.52 100.0 MIR410-201 miRNA sigmoid colon (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 914.00 89.70 5.88 100.0 MIR409-201 miRNA sigmoid colon (Tissue)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 1.00 0.10 0.01 100.0 MIR409-201 miRNA sigmoid colon (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 376.00 100.00 2.42 100.0 MIR411-201 miRNA sigmoid colon (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 7117.00 93.42 45.79 95.62 MIR26B-201 miRNA sigmoid colon (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 547.00 61.67 3.52 65.27 MIR148B-201 miRNA sigmoid colon (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 6152.00 93.74 39.58 98.27 MIRLET7G-201 miRNA sigmoid colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 775.00 3.45 4.99 100.0 MIR30D-201 miRNA sigmoid colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 13618.00 60.68 87.61 90.35 MIR30D-201 miRNA sigmoid colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 6317.00 28.15 40.64 81.29 MIR30D-201 miRNA sigmoid colon (Tissue)