ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 3659.00 9.36 23.54 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1292.00 3.31 8.31 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 1055.00 2.70 6.79 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1744.77 4.47 11.22 32.99 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 4179.62 10.70 26.89 62.75 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1452.76 3.72 9.35 27.7 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 5661.27 14.49 36.42 81.12 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 8.00 2.52 0.05 100.0 ENST00000756452 lncRNA sigmoid colon (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 591.00 6.49 3.80 100.0 ENST00000760093 lncRNA sigmoid colon (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 3018.00 33.15 19.42 100.0 ENST00000760093 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 13.00 0.05 0.08 100.0 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 6047.00 23.74 38.90 86.41 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 143.00 0.56 0.92 100.0 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 7976.00 31.31 51.31 78.24 LINC02806-241 lncRNA sigmoid colon (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 3991.00 96.59 25.67 100.0 EHBP1-AS1-210 lncRNA sigmoid colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 496.00 15.95 3.19 100.0 ENST00000770398 lncRNA sigmoid colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 522.00 16.78 3.36 100.0 ENST00000770398 lncRNA sigmoid colon (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 1349.00 43.38 8.68 100.0 ENST00000770398 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 25065.00 72.55 161.25 96.25 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 1721.00 4.98 11.07 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 491.00 1.42 3.16 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 450.00 1.30 2.89 100.0 ENST00000771298 lncRNA sigmoid colon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 10.00 3.42 0.06 100.0 ENST00000772672 lncRNA sigmoid colon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 427.00 36.87 2.75 100.0 ENST00000773843 lncRNA sigmoid colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 280655.00 58.13 1805.51 92.42 SNHG12-223 lncRNA sigmoid colon (Tissue)