ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 14015.00 50.99 90.16 81.19 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 84.00 0.31 0.54 34.01 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 6443.00 23.44 41.45 62.49 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 467.00 1.70 3.00 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 2448.00 8.91 15.75 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 540.00 1.96 3.47 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1660.00 0.59 10.68 91.66 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 13284.00 4.69 85.46 69.15 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 649.00 0.23 4.18 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 17365.00 6.12 111.71 56.77 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 93.00 0.03 0.60 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 254.00 0.09 1.63 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 567.00 0.20 3.65 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 40650.00 14.34 261.51 46.99 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1442.00 0.51 9.28 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 166457.00 58.71 1070.85 85.73 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 3805.00 1.18 24.48 100.0 MIRLET7A1HG-203 lncRNA sigmoid colon (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1089.00 87.68 7.01 100.0 MEG8-225 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2844.00 71.26 18.30 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 236.00 5.91 1.52 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 233.00 5.84 1.50 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 156.00 5.33 1.00 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 51.00 1.74 0.33 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 453.00 6.47 2.91 100.0 ENST00000655317 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 4390.00 62.69 28.24 95.04 ENST00000655317 lncRNA sigmoid colon (Tissue)