ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 17284.00 22.15 158.76 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 1303.00 1.67 11.97 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 12346.00 15.82 113.40 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 2236.00 2.87 20.54 82.75 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 241.00 59.36 2.21 100.0 MIR124-1HG-216 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 144.00 20.96 1.32 100.0 SNHG10-212 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 7836.22 55.99 71.98 97.26 SNHG19-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 219.05 1.56 2.01 5.52 SNHG19-202 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 71467.00 65.37 656.44 100.0 MIR222HG-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 26085.00 23.86 239.60 92.4 MIR222HG-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 2136.00 1.95 19.62 100.0 MIR222HG-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 53754.00 2.75 493.74 44.47 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 117059.08 5.98 1075.21 81.88 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 67119.00 3.43 616.50 69.23 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 27767.55 1.42 255.05 27.3 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 557747.00 28.49 5123.03 100.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 545738.00 27.88 5012.72 96.08 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 174245.00 8.90 1600.48 86.31 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 44559.00 2.28 409.28 100.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 41012.00 2.10 376.70 100.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 75969.00 3.88 697.79 48.0 MIR302CHG-205 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 91.00 13.52 0.84 100.0 RPSA-216 retained intron mesendoderm (In vitro differentiated cells)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 4.00 66.67 0.04 100.0 MIR99AHG-370 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 23699.00 98.85 217.68 100.0 HPS4-237 retained intron mesendoderm (In vitro differentiated cells)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 152.00 78.76 1.40 100.0 MEG8-253 lncRNA mesendoderm (In vitro differentiated cells)