ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 12.00 0.01 0.11 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 51.00 0.03 0.47 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 93.00 0.06 0.85 100.0 SNHG1-248 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 1086.00 11.53 9.98 100.0 SNHG14-315 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 374.00 3.97 3.44 93.97 SNHG14-315 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 602.00 6.39 5.53 88.53 SNHG14-315 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1355.00 2.31 12.45 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 2302.33 3.92 21.15 18.7 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 1.00 0.00 0.01 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 133.00 0.23 1.22 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 12478.42 21.24 114.62 85.77 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 213.00 0.36 1.96 46.3 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 134.00 0.23 1.23 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 32592.00 55.47 299.36 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 1.00 0.00 0.01 100.0 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 2434.00 4.14 22.36 96.17 SNHG5-273 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 20.00 0.32 0.18 83.33 SNHG14-323 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 16.00 8.00 0.15 94.12 MEG8-251 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1.00 0.50 0.01 100.0 MEG8-251 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 395.00 17.28 3.63 82.29 SNHG14-336 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 291.00 12.73 2.67 47.01 SNHG14-336 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 149.00 2.50 1.37 94.9 SNHG14-341 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 3205.00 70.77 29.44 100.0 FMN2-209 protein coding CDS not defined mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 2.00 0.00 0.02 100.0 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 466.00 0.60 4.28 17.25 LINC02739-203 lncRNA mesendoderm (In vitro differentiated cells)