ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 30256.00 71.89 277.91 96.21 SNORD12B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 4260.00 10.12 39.13 100.0 SNORD12B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 1.00 0.08 0.01 100.0 Y_RNA.609-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 212.00 38.06 1.95 100.0 Y_RNA.612-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 272.00 43.52 2.50 96.11 SNORD71-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 15.00 2.40 0.14 100.0 SNORD71-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 14.00 2.24 0.13 100.0 SNORD71-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 6025.00 22.30 55.34 60.16 MIR194-2HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 20310.00 75.16 186.55 80.24 MIR194-2HG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 8199.00 99.71 75.31 100.0 RPS7P15-201 processed pseudogene mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 1.00 0.01 0.01 100.0 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 136.00 1.06 1.25 100.0 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 917.00 7.17 8.42 100.0 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 10752.00 84.04 98.76 96.55 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 20.00 0.16 0.18 100.0 SNORD62B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 28479.00 98.02 261.59 100.0 MRPL32-203 nonsense mediated decay mesendoderm (In vitro differentiated cells)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1413.00 98.74 12.98 100.0 ENST00000436739 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 13.00 1.27 0.12 100.0 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 13.00 1.27 0.12 28.26 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 3.00 0.29 0.03 100.0 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 123.00 11.98 1.13 100.0 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1.00 0.10 0.01 33.33 TMEM107-204 protein coding mesendoderm (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 115.00 14.78 1.06 100.0 SNHG16-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 68.00 8.74 0.62 68.0 SNHG16-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 2112.00 80.09 19.40 99.58 SNORD105B-201 snoRNA mesendoderm (In vitro differentiated cells)