ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1837.00 24.43 12.17 100.0 ZFAS1-238 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 796.00 10.59 5.27 100.0 ZFAS1-238 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 1727.00 34.29 11.44 100.0 ZFAS1-242 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 74.00 1.47 0.49 100.0 ZFAS1-242 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 72.00 27.38 0.48 100.0 ENST00000837997 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 68.00 25.86 0.45 100.0 ENST00000837997 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 11397.00 65.64 75.50 78.75 ENST00000839036 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 280.00 13.14 1.85 100.0 ENST00000849527 lncRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 8862.00 16.86 58.70 91.31 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 11076.00 21.07 73.37 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 917.00 0.57 6.07 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 2342.00 47.78 15.51 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 7.00 0.14 0.05 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 257.00 8.21 1.70 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 692.00 2.53 4.58 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 46.00 0.52 0.30 19.09 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 1498.00 0.94 9.92 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 1.00 0.42 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 979.00 5.19 6.49 98.99 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 2850.00 15.10 18.88 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 9.00 0.05 0.06 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1941.00 27.52 12.86 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1011.00 0.87 6.70 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 25198.00 21.72 166.92 91.24 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 774.00 0.67 5.13 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA trophoblast cell (In vitro differentiated cells)